- Description
- Migrate estimates effective population sizes and past migration rates between n population assuming a migration matrix model with asymmetric migration rates and different subpopulation sizes. Migrate uses maximum likelihood or Bayesian inference to jointly estimate all parameters.
- Modulefile
migrate- Documentation
- Migrate homepage
- Examples
$MIGRATE/example- Usage
- Here is an example of a submission script how to run Migrate:
#$ -cwd
#$ -l h_rt=01:00:00
module purge
module load gcc openmpi/gcc migrate
migrate-n parmfile.testml -nomenu
- Here is an example of a submission script how to run Migrate in parallel:
#$ -cwd
#$ -l h_rt=01:00:00
#$ -pe ompi* 4
module purge
module load gcc openmpi/gcc migrate
mpirun migrate-n-mpi parmfile.testml -nomenu